ZSWIM6

Chr 5

zinc finger SWIM-type containing 6

Also known as: AFND, NEDMAGA

The protein encoded by this gene contains a zinc finger SWI2/SNF2 and MuDR (SWIM) domain. Proteins with SWIM domains have been found in a diverse number of species and are predicted to interact with DNA or proteins. Mutations in this gene result in acromelic frontonasal dysostosis. [provided by RefSeq, Apr 2017]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtAcromelic frontonasal dysostosis
UniProtNeurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features

Clinical highlights

Gene-disease validity (ClinGen)
acromelic frontonasal dysostosis · ADDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Gain of function is the curated mechanism (Gene2Phenotype), so a variant that simply removes the protein may not be the pathogenic class here — missense variants in functional domains often carry more weight.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
8
Pubs (1 yr)
P/LP submissions
P/LP missense
0.07
LOEUF· LoF intol.
GOF*
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.07LOEUF
pLI 1.000
Z-score 6.17
OE 0.00 (0.000.07)
Highly constrained

Among the most LoF-intolerant genes (~top 3%)

Missense Constraint?
4.18Z-score
OE missense 0.51 (0.460.56)
291 obs / 572.0 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.00 (0.000.07)
00.351.4
Missense OE?0.51 (0.460.56)
00.61.4
Synonymous OE?0.89
01.21.6
LoF obs/exp: 0 / 44.3Missense obs/exp: 291 / 572.0Syn Z: 1.28

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ZSWIM6 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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