ZKSCAN2

Chr 16

zinc finger with KRAB and SCAN domains 2

Also known as: ZNF694

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Jul 2025]

ResearchGenerating clinical summary…
0
Active trials
2
Pubs (1 yr)
P/LP submissions
P/LP missense
0.55
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.55LOEUF
pLI 0.000
Z-score 3.92
OE 0.36 (0.240.55)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.25Z-score
OE missense 0.97 (0.901.04)
528 obs / 544.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.36 (0.240.55)
00.351.4
Missense OE?0.97 (0.901.04)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 16 / 44.1Missense obs/exp: 528 / 544.3Syn Z: -0.90

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ZKSCAN2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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