ZFP92

Chr X

ZFP92 zinc finger protein

Also known as: ZNF897

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2025]

0
Active trials
0
Pathogenic / LP
0
ClinVar variants
1
Pubs (1 yr)
2.0
Missense Z
0.62
LOEUF
Clinical SummaryZFP92
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.65) — some intolerance to loss-of-function variants.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.62LOEUF
pLI 0.652
Z-score 2.23
OE 0.13 (0.040.62)
Moderately constrained

Typical tolerance to LoF variation

Missense Constraint
2.05Z-score
OE missense 0.56 (0.480.67)
98 obs / 173.9 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios
LoF OE0.13 (0.040.62)
00.351.4
Missense OE0.56 (0.480.67)
00.61.4
Synonymous OE0.81
01.21.6
LoF obs/exp: 1 / 7.7Missense obs/exp: 98 / 173.9Syn Z: 1.40
GOFDN
DN
0.6454th %ile
GOF
0.6834th %ile
LOF
0.48top 25%

This gene has evidence for multiple mechanisms of pathogenicity (gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to gain-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

GOFprediction above median
DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

ZFP92 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Landmark / reviewRecent case evidence