YIPF5

Chr 5AR

Yip1 domain family member 5

Also known as: FinGER5, MEDS2, SB140, SMAP-5, SMAP5, YIP1A, YIPFalpha1A

Involved in insulin processing and regulation of ER to Golgi vesicle-mediated transport. Located in Golgi apparatus and endoplasmic reticulum. [provided by Alliance of Genome Resources, Jun 2026]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Microcephaly, epilepsy, and diabetes syndrome 2MIM #619278
AR

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
4
Pubs (1 yr)
P/LP submissions
P/LP missense
0.23
LOEUF· LoF intol.
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.23LOEUF
pLI 0.985
Z-score 3.31
OE 0.00 (0.000.23)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
0.68Z-score
OE missense 0.84 (0.720.98)
112 obs / 134.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.00 (0.000.23)
00.351.4
Missense OE?0.84 (0.720.98)
00.61.4
Synonymous OE?0.78
01.21.6
LoF obs/exp: 0 / 12.8Missense obs/exp: 112 / 134.1Syn Z: 1.25

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

YIPF5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →