YBX3

Chr 12

Y-box binding protein 3

Also known as: CSDA, CSDA1, DBPA, ZONAB

Enables RNA binding activity. Involved in cellular hyperosmotic response; cellular response to tumor necrosis factor; and negative regulation of programmed cell death. Located in cytosol. [provided by Alliance of Genome Resources, Jul 2025]

OMIMResearchGenerating clinical summary…
0
Active trials
30
Pubs (1 yr)
P/LP submissions
P/LP missense
0.96
LOEUF
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.96LOEUF
pLI 0.000
Z-score 1.68
OE 0.58 (0.360.96)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.11Z-score
OE missense 0.98 (0.881.09)
222 obs / 226.7 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.58 (0.360.96)
00.351.4
Missense OE?0.98 (0.881.09)
00.61.4
Synonymous OE?1.13
01.21.6
LoF obs/exp: 11 / 18.9Missense obs/exp: 222 / 226.7Syn Z: -0.83

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

YBX3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →