YARS2

Chr 12AR

tyrosyl-tRNA synthetase 2

Also known as: CGI-04, MLASA2, MT-TYRRS, TYRRS

This gene encodes a mitochondrial protein that catalyzes the attachment of tyrosine to tRNA(Tyr). Mutations in this gene are associated with myopathy with lactic acidosis and sideroblastic anemia type 2 (MLASA2). [provided by RefSeq, Jan 2011]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Myopathy, lactic acidosis, and sideroblastic anemia 2MIM #613561
AR
UniProtMyopathy with lactic acidosis and sideroblastic anemia 2

Clinical highlights

Gene-disease validity (ClinGen)
mitochondrial disease · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
13
Pubs (1 yr)
P/LP submissions
P/LP missense
1.26
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.26LOEUF
pLI 0.000
Z-score 0.63
OE 0.85 (0.591.26)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.26Z-score
OE missense 0.95 (0.861.06)
247 obs / 259.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.85 (0.591.26)
00.351.4
Missense OE?0.95 (0.861.06)
00.61.4
Synonymous OE?1.12
01.21.6
LoF obs/exp: 18 / 21.1Missense obs/exp: 247 / 259.0Syn Z: -0.97

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

YARS2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.