VTA1

Chr 6

vesicle trafficking 1

Also known as: 6orf55, C6orf55, DRG-1, HSPC228, LIP5, My012, SBP1

C6ORF55 encodes a protein involved in trafficking of the multivesicular body, an endosomal compartment involved in sorting membrane proteins for degradation in lysosomes (Ward et al., 2005 [PubMed 15644320]).[supplied by OMIM, Mar 2008]

ResearchGenerating clinical summary…
0
Active trials
8
Pubs (1 yr)
P/LP submissions
P/LP missense
0.90
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.90LOEUF
pLI 0.000
Z-score 1.85
OE 0.50 (0.290.90)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
-0.31Z-score
OE missense 1.07 (0.941.21)
181 obs / 169.5 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.50 (0.290.90)
00.351.4
Missense OE?1.07 (0.941.21)
00.61.4
Synonymous OE?1.14
01.21.6
LoF obs/exp: 8 / 16.0Missense obs/exp: 181 / 169.5Syn Z: -0.83

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

VTA1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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