VEGFA

Chr 6

vascular endothelial growth factor A

Also known as: L-VEGF, MVCD1, VEGF, VPF

This gene is a member of the PDGF/VEGF growth factor family. It encodes a heparin-binding protein, which exists as a disulfide-linked homodimer. This growth factor induces proliferation and migration of vascular endothelial cells, and is essential for both physiological and pathological angiogenesis. Disruption of this gene in mice resulted in abnormal embryonic blood vessel formation. This gene is upregulated in many known tumors and its expression is correlated with tumor stage and progression. Elevated levels of this protein are found in patients with POEMS syndrome, also known as Crow-Fukase syndrome. Allelic variants of this gene have been associated with microvascular complications of diabetes 1 (MVCD1) and atherosclerosis. Alternatively spliced transcript variants encoding different isoforms have been described. There is also evidence for alternative translation initiation from upstream non-AUG (CUG) codons resulting in additional isoforms. A recent study showed that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is antiangiogenic. Expression of some isoforms derived from the AUG start codon is regulated by a small upstream open reading frame, which is located within an internal ribosome entry site. The levels of VEGF are increased during infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), thus promoting inflammation by facilitating recruitment of inflammatory cells, and by increasing the level of angiopoietin II (Ang II), one of two products of the SARS-CoV-2 binding target, angiotensin-converting enzyme 2 (ACE2). In turn, Ang II facilitates the elevation of VEGF, thus forming a vicious cycle in the release of inflammatory cytokines. [provided by RefSeq, Jun 2020]

Primary Disease Associations & Inheritance

{Microvascular complications of diabetes 1}MIM #603933
105
ClinVar variants
12
Pathogenic / LP
0.00
pLI score
12
Active trials
Clinical SummaryVEGFA
🧬
Gene-Disease Validity (ClinGen)
congenital heart disease · ADLimited

Limited evidence — not for standalone diagnostic reporting

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
12 Pathogenic / Likely Pathogenic· 63 VUS of 105 total submissions
💊
Clinical Trials
12 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
0.84LOEUF
pLI 0.000
Z-score 2.12
OE 0.51 (0.320.84)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
0.47Z-score
OE missense 0.91 (0.811.02)
203 obs / 222.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.51 (0.320.84)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.0.91 (0.811.02)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.11
01.21.6
LoF obs/exp: 11 / 21.7Missense obs/exp: 203 / 222.6Syn Z: -0.82

ClinVar Variant Classifications

105 submitted variants in ClinVar

Classification Summary

Pathogenic9
Likely Pathogenic3
VUS63
Likely Benign20
Benign10
9
Pathogenic
3
Likely Pathogenic
63
VUS
20
Likely Benign
10
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
9
0
9
Likely Pathogenic
2
0
1
0
3
VUS
8
50
5
0
63
Likely Benign
0
8
2
10
20
Benign
0
0
9
1
10
Total10582611105

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

VEGFA · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

{Microvascular complications of diabetes 1}

MIM #603933

Molecular basis of disorder known

Clinical Literature
Landmark / reviewRecent case evidence

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

Neovascular Age-related Macular DegenerationDiabetic Macular EdemaRetinal Vein Occlusion

VEGFA-targeting Gene Therapy to Treat Retinal and Choroidal Neovascularization Diseases

ACTIVE NOT RECRUITING
NCT05099094Phase EARLY_PHASE1Shanghai BDgene Co., Ltd.Started 2021-11-25
BD311
Neovascular Age-Related Macular Degeneration (nAMD)

Open-laBel Dose-escalation Study for CRISPR/cas13- Rna TargetInG THerapy for the Treatment of Neovascular Age-related Macular Degeneration in Phase I Trial

NOT YET RECRUITING
NCT06623279Phase PHASE1HuidaGene Therapeutics Co., Ltd.Started 2025-04-01
HG202
AMDnAMDWet Age-related Macular Degeneration

Pivotal 2 Study of RGX-314 Gene Therapy in Participants With nAMD

RECRUITING
NCT05407636Phase PHASE3AbbVieStarted 2022-01-13
ABBV-RGX-314 Dose 1ABBV-RGX-314 Dose 2Aflibercept (EYLEA®)
Severe Lower Limb Ischemia

The Endovascular Plus GENe Therapy Versus Only EndoVascular Therapy for Severe Limb ischaemiA Trial

RECRUITING
NCT06473740Phase PHASE4Amur State Medical AcademyStarted 2024-06-20
Deoxyribonucleic acid supercoiled plasmid pCMV-VEGF165 (Neovasculgen)
AsthmaRespiratory Disease

Airway Remodeling and Rhinovirus in Asthmatics

RECRUITING
NCT05775952University of CalgaryStarted 2011-09-01
HRV-39
Recurrent Lung Non-Small Cell CarcinomaStage IV Lung Cancer AJCC v8

Treatment for Advanced Non-small Cell Lung Cancer With Actionable Genomic Alterations After Targeted Treatment and Chemotherapy (An Expanded Lung-MAP Treatment Trial)

NOT YET RECRUITING
NCT07393555Phase PHASE2SWOG Cancer Research NetworkStarted 2026-08-07
Biospecimen CollectionComputed TomographyIvonescimab
Von Willebrand DiseasesGlanzmann Thrombasthenia

Videomicroscopy for the Prediction of Bleeding in Constitutional Haemorrhagic Diseases

RECRUITING
NCT04119908Phase NAUniversity Hospital, LilleStarted 2023-05-24
Sublingual videomicroscopyblood sample
Systemic Inflammatory Response Syndrome

Determinants of Vascular Leakage During Systemic Inflammatory Response Syndrome

RECRUITING
NCT05663216Assistance Publique - Hôpitaux de ParisStarted 2023-05-31
Blood sampling
Colorectal Neuroendocrine Tumor G1Gastric Neuroendocrine Tumor G1Neuroendocrine Neoplasm

Octreotide Acetate and Recombinant Interferon Alfa-2b or Bevacizumab in Treating Patients With Metastatic or Locally Advanced, High-Risk Neuroendocrine Tumor

ACTIVE NOT RECRUITING
NCT00569127Phase PHASE3National Cancer Institute (NCI)Started 2007-12-01
BevacizumabLaboratory Biomarker AnalysisOctreotide Acetate
Age-related Muscle Decline

CALM-AF-AI: Counteracting Age-related Loss of Muscle With AAV-Follistatin Combined With Angiogenesis-Inducing VEGF Plasmid Gene Therapy

RECRUITING
NCT07443826Phase PHASE1, PHASE2Unlimited Biotechnology LLCStarted 2026-03-31
AAV9-Follistatin gene therapyVEGF Plasmid
Low Back Pain

The Prognostic Value of Biomarkers and the Effect of Tolperisone in Acute Low Back Pain and Sciatic Pain "BETA"

ACTIVE NOT RECRUITING
NCT05544656Phase PHASE3Semmelweis UniversityStarted 2019-12-13
Tolperisone HydrochloridePlacebo
AMDnAMDWet Age-related Macular Degeneration

Pivotal 1 Study of ABBV-RGX-314 (Also Known as RGX-314) Gene Therapy Administered Via Subretinal Delivery One Time in Participants With nAMD

RECRUITING
NCT04704921Phase PHASE2, PHASE3AbbVieStarted 2020-12-29
ABBV-RGX-314ABBV-RGX-314Ranibizumab (LUCENTIS®)