UGT2B17

Chr 4

UDP glucuronosyltransferase family 2 member B17

Also known as: BMND12, UDPGT2B17

The encoded UDP-glucuronosyltransferase catalyzes glucuronidation of steroid hormones including androgens and estrogens, facilitating their excretion by increasing water solubility. Copy number variation in this gene is associated with susceptibility to osteoporosis and bone mineral density quantitative trait loci, with inheritance patterns related to the specific genomic variation present.

OMIMResearchSummary from RefSeq, OMIM, UniProt
MultiplemechanismLOEUF 1.051 OMIM phenotype
Clinical SummaryUGT2B17
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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Clinical Trials
2 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.05LOEUF
pLI 0.000
Z-score 1.38
OE 0.67 (0.441.05)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.69Z-score
OE missense 0.88 (0.790.98)
238 obs / 269.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.67 (0.441.05)
00.351.4
Missense OE0.88 (0.790.98)
00.61.4
Synonymous OE0.90
01.21.6
LoF obs/exp: 14 / 20.8Missense obs/exp: 238 / 269.9Syn Z: 0.77
DN
0.81top 10%
GOF
0.7125th %ile
LOF
0.1697th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

UGT2B17 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
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