UGGT2

Chr 13

UDP-glucose glycoprotein glucosyltransferase 2

Also known as: HUGT2, UGCGL2, UGT2

UGGT2 encodes UDP-glucose:glycoprotein glucosyltransferase, which provides quality control for protein folding in the endoplasmic reticulum by reglucosylating misfolded glycoproteins to allow their recognition by calreticulin for refolding or degradation. Mutations cause autosomal recessive intellectual disability with distinctive facial features and variable congenital anomalies. The gene shows tolerance to loss-of-function variation in the general population.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 1.06
Clinical SummaryUGGT2
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
81 unique Pathogenic / Likely Pathogenic· 205 VUS of 347 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.06LOEUF
pLI 0.000
Z-score 1.10
OE 0.87 (0.711.06)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.02Z-score
OE missense 1.00 (0.941.06)
761 obs / 759.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.87 (0.711.06)
00.351.4
Missense OE1.00 (0.941.06)
00.61.4
Synonymous OE0.85
01.21.6
LoF obs/exp: 69 / 79.6Missense obs/exp: 761 / 759.4Syn Z: 1.90

ClinVar Variant Classifications

347 submitted variants in ClinVar

Classification Summary

Pathogenic81
VUS205
Likely Benign20
Benign4
81
Pathogenic
205
VUS
20
Likely Benign
4
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
81
0
81
Likely Pathogenic
0
0
0
0
0
VUS
0
193
12
0
205
Likely Benign
0
16
1
3
20
Benign
0
2
2
0
4
Total0211963310

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

UGGT2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 2 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC