UBALD1

Chr 16

UBA like domain containing 1

Also known as: FAM100A, PP11303

ResearchGenerating clinical summary…
LOFmechanismLOEUF 0.56
Clinical SummaryUBALD1
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.80) — some intolerance to loss-of-function variants.
📋
ClinVar Variants
28 VUS of 32 total submissions
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.56LOEUF
pLI 0.803
Z-score 2.15
OE 0.00 (0.000.56)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.32Z-score
OE missense 0.61 (0.490.76)
55 obs / 90.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.00 (0.000.56)
00.351.4
Missense OE?0.61 (0.490.76)
00.61.4
Synonymous OE?1.60
01.21.6
LoF obs/exp: 0 / 5.4Missense obs/exp: 55 / 90.3Syn Z: -2.97

This gene — mechanism propensity

DN
0.3694th %ile
GOF
0.5856th %ile
LOF
0.71top 10%

The highest-scoring mechanism for this gene is loss-of-function (haploinsufficiency).

LOFprediction above median

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

32 submitted variants in ClinVar

Classification Summary

VUS28
Likely Benign1
28
VUS
1
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
0
0
0
Likely Pathogenic
0
0
0
0
0
VUS
0
28
0
0
28
Likely Benign
0
1
0
0
1
Benign
0
0
0
0
0
Total0290029

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

29 pathogenic / likely-pathogenic (of 42) ClinVar copy-number / structural variants overlap UBALD1 — these span large chromosomal regions, not the gene specifically, and are excluded from the counts above. Explore in CNV tools →

Protein Context — Lollipop Plot

UBALD1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →