TTR

Chr 18AD

transthyretin

Also known as: AMYLD1, ATTR, CTS, CTS1, HEL111, HsT2651, PALB, TBPA

This gene encodes one of the three prealbumins, which include alpha-1-antitrypsin, transthyretin and orosomucoid. The encoded protein, transthyretin, is a homo-tetrameric carrier protein, which transports thyroid hormones in the plasma and cerebrospinal fluid. It is also involved in the transport of retinol (vitamin A) in the plasma by associating with retinol-binding protein. The protein may also be involved in other intracellular processes including proteolysis, nerve regeneration, autophagy and glucose homeostasis. Mutations in this gene are associated with amyloid deposition, predominantly affecting peripheral nerves or the heart, while a small percentage of the gene mutations are non-amyloidogenic. The mutations are implicated in the etiology of several diseases, including amyloidotic polyneuropathy, euthyroid hyperthyroxinaemia, amyloidotic vitreous opacities, cardiomyopathy, oculoleptomeningeal amyloidosis, meningocerebrovascular amyloidosis and carpal tunnel syndrome. [provided by RefSeq, Aug 2017]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

[Dystransthyretinemic hyperthyroxinemia]MIM #145680
AD
Amyloidosis, hereditary systemic 1MIM #105210
AD
Carpal tunnel syndrome, familialMIM #115430
AD
UniProtHyperthyroxinemia, dystransthyretinemic

Clinical highlights

Interpreting a novel variant
Gain of function is the curated mechanism (Gene2Phenotype), so a variant that simply removes the protein may not be the pathogenic class here — missense variants in functional domains often carry more weight.Curated gene-level mechanism — a prior for triage, not a per-variant call.
4
Active trials
972
Pubs (1 yr)
—
P/LP submissions
—
P/LP missense
0.76
LOEUF
GOF
Mechanism· G2P
📖
GeneReview available — TTR
Authoritative clinical overview · Recommended first read
Open GeneReview ↗

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.76LOEUF
pLI 0.516
Z-score 1.94
OE 0.16 (0.06–0.76)
Moderately constrained

Typical tolerance to LoF variation

Missense Constraint?
1.01Z-score
OE missense 0.69 (0.55–0.86)
57 obs / 83.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.16 (0.06–0.76)
0≤0.351.4
Missense OE?0.69 (0.55–0.86)
0≤0.61.4
Synonymous OE?0.90
0≤1.21.6
LoF obs/exp: 1 / 6.2Missense obs/exp: 57 / 83.0Syn Z: 0.43

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TTR · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.