TSR1

Chr 17

TSR1 ribosome maturation factor

The TSR1 protein is required for maturation of the 40S ribosomal subunit in the nucleolus through RNA binding and processing of ribosomal RNA transcripts. Mutations cause autosomal recessive intellectual disability with congenital malformations and dysmorphic facies, typically presenting in early infancy with developmental delays and distinctive facial features. This gene is highly intolerant to loss-of-function variants, reflecting its essential role in ribosome biogenesis.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 1.12
Clinical SummaryTSR1
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.12LOEUF
pLI 0.000
Z-score 0.92
OE 0.85 (0.641.12)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.06Z-score
OE missense 1.01 (0.931.09)
445 obs / 441.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.85 (0.641.12)
00.351.4
Missense OE1.01 (0.931.09)
00.61.4
Synonymous OE1.03
01.21.6
LoF obs/exp: 35 / 41.4Missense obs/exp: 445 / 441.2Syn Z: -0.33

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TSR1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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