TPP2

Chr 13

tripeptidyl peptidase 2

Also known as: IMD78, TPP-2, TPP-II, TPPII

This gene encodes a mammalian peptidase that, at neutral pH, removes tripeptides from the N terminus of longer peptides. The protein has a specialized function that is essential for some MHC class I antigen presentation. The protein is a high molecular mass serine exopeptidase; the amino acid sequence surrounding the serine residue at the active site is similar to the peptidases of the subtilisin class rather than the trypsin class. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtImmunodeficiency 78 with autoimmunity and developmental delay

Clinical highlights

Gene-disease validity (ClinGen)
immunodeficiency 78 with autoimmunity and developmental delay · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
0.26
LOEUF· LoF intol.
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.26LOEUF
pLI 0.999
Z-score 6.28
OE 0.16 (0.100.26)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
3.86Z-score
OE missense 0.57 (0.530.63)
374 obs / 651.3 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.16 (0.100.26)
00.351.4
Missense OE?0.57 (0.530.63)
00.61.4
Synonymous OE?1.03
01.21.6
LoF obs/exp: 10 / 64.4Missense obs/exp: 374 / 651.3Syn Z: -0.39

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TPP2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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