TNFRSF13B

Chr 17

TNF receptor superfamily member 13B

Also known as: CD267, CVID, CVID2, IGAD2, RYZN, TACI, TNFRSF14B

The protein encoded by this gene is a lymphocyte-specific member of the tumor necrosis factor (TNF) receptor superfamily. It interacts with calcium-modulator and cyclophilin ligand (CAML). The protein induces activation of the transcription factors NFAT, AP1, and NF-kappa-B and plays a crucial role in humoral immunity by interacting with a TNF ligand. This gene is located within the Smith-Magenis syndrome region on chromosome 17. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtImmunodeficiency, common variable, 2
UniProtImmunoglobulin A deficiency 2

Clinical highlights

Gene-disease validity (ClinGen)
immunodeficiency, common variable, 2 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
52
Pubs (1 yr)
P/LP submissions
P/LP missense
1.96
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.96LOEUF
pLI 0.000
Z-score -2.17
OE 1.73 (1.141.96)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-1.20Z-score
OE missense 1.26 (1.131.41)
215 obs / 170.8 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.73 (1.141.96)
00.351.4
Missense OE?1.26 (1.131.41)
00.61.4
Synonymous OE?1.15
01.21.6
LoF obs/exp: 18 / 10.4Missense obs/exp: 215 / 170.8Syn Z: -0.99

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TNFRSF13B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →