TMPRSS11B

Chr 4

transmembrane serine protease 11B

Also known as: HATL5

TMPRSS11B encodes a serine protease located in the plasma membrane that cleaves proteins. The gene is not highly constrained against loss-of-function variants (LOEUF 1.75), and no definitive disease associations have been established in the current medical literature.

ResearchSummary from RefSeq, UniProt
DNmechanismLOEUF 1.75
Clinical SummaryTMPRSS11B
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
19 unique Pathogenic / Likely Pathogenic· 68 VUS of 92 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.75LOEUF
pLI 0.000
Z-score -1.11
OE 1.27 (0.921.75)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.36Z-score
OE missense 1.07 (0.961.19)
231 obs / 216.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE1.27 (0.921.75)
00.351.4
Missense OE1.07 (0.961.19)
00.61.4
Synonymous OE0.69
01.21.6
LoF obs/exp: 25 / 19.7Missense obs/exp: 231 / 216.2Syn Z: 2.03
DN
0.6648th %ile
GOF
0.5758th %ile
LOF
0.3841th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

92 submitted variants in ClinVar

Classification Summary

Pathogenic18
Likely Pathogenic1
VUS68
Likely Benign4
18
Pathogenic
1
Likely Pathogenic
68
VUS
4
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
18
0
18
Likely Pathogenic
0
0
1
0
1
VUS
0
59
9
0
68
Likely Benign
0
4
0
0
4
Benign
0
0
0
0
0
Total06328091

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

TMPRSS11B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC