TMEM67

Chr 8AR

transmembrane protein 67

Also known as: JBTS6, MECKELIN, MKS3, NPHP11, TNEM67

The protein encoded by this gene localizes to the primary cilium and to the plasma membrane. The gene functions in centriole migration to the apical membrane and formation of the primary cilium. Multiple transcript variants encoding different isoforms have been found for this gene. Defects in this gene are a cause of Meckel syndrome type 3 (MKS3) and Joubert syndrome type 6 (JBTS6). [provided by RefSeq, Nov 2008]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?RHYNS syndromeMIM #602152
AR
{Bardet-Biedl syndrome 14, modifier of}MIM #615991
AR
COACH syndrome 1MIM #216360
AR
Joubert syndrome 6MIM #610688
AR
Meckel syndrome 3MIM #607361
AR
Nephronophthisis 11MIM #613550
AR

Clinical highlights

Gene-disease validity (ClinGen)
ciliopathy · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
18
Pubs (1 yr)
P/LP submissions
P/LP missense
0.94
LOEUF
LOF
Mechanism· G2P
📖
GeneReview available — TMEM67
Authoritative clinical overview · Recommended first read
Open GeneReview ↗

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.94LOEUF
pLI 0.000
Z-score 1.92
OE 0.74 (0.580.94)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.49Z-score
OE missense 0.94 (0.871.01)
483 obs / 514.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.74 (0.580.94)
00.351.4
Missense OE?0.94 (0.871.01)
00.61.4
Synonymous OE?0.88
01.21.6
LoF obs/exp: 46 / 62.3Missense obs/exp: 483 / 514.4Syn Z: 1.27

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TMEM67 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.