TMEM63C

Chr 14AR

transmembrane protein 63C

Also known as: C14orf171, CSC1, SPG87, hTMEM63C, hsCSC1

Enables calcium-activated cation channel activity. Involved in monoatomic cation transport. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in plasma membrane. Implicated in hereditary spastic paraplegia 87. Biomarker of focal segmental glomerulosclerosis. [provided by Alliance of Genome Resources, Apr 2025]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Spastic paraplegia 87, autosomal recessiveMIM #619966
AR

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
0
Pubs (1 yr)
P/LP submissions
P/LP missense
0.40
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.40LOEUF
pLI 0.243
Z-score 4.63
OE 0.23 (0.140.40)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.07Z-score
OE missense 0.74 (0.680.80)
360 obs / 488.5 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.23 (0.140.40)
00.351.4
Missense OE?0.74 (0.680.80)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 10 / 42.6Missense obs/exp: 360 / 488.5Syn Z: 0.17

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TMEM63C · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →