TMEM210

Chr 9

transmembrane protein 210

TMEM210 encodes a protein located in the acrosomal vesicle, which is involved in sperm function and fertilization. Mutations in this gene cause male infertility due to defects in sperm development or function, following an autosomal recessive inheritance pattern. The gene shows moderate constraint against loss-of-function variants, consistent with its role in reproductive function.

ResearchSummary from RefSeq
MultiplemechanismLOEUF 0.89
Clinical SummaryTMEM210
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.64) — some intolerance to loss-of-function variants.
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ClinVar Variants
6 unique Pathogenic / Likely Pathogenic· 1 VUS of 7 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.89LOEUF
pLI 0.645
Z-score 1.69
OE 0.00 (0.000.89)
Moderately constrained

Typical tolerance to LoF variation

Missense Constraint
0.21Z-score
OE missense 0.93 (0.771.14)
70 obs / 75.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.00 (0.000.89)
00.351.4
Missense OE0.93 (0.771.14)
00.61.4
Synonymous OE0.94
01.21.6
LoF obs/exp: 0 / 3.3Missense obs/exp: 70 / 75.1Syn Z: 0.26
DN
0.6162th %ile
GOF
0.83top 10%
LOF
0.2872th %ile

This gene has evidence for multiple mechanisms of pathogenicity (gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to gain-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

GOFprediction above median
DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

7 submitted variants in ClinVar

Classification Summary

Pathogenic6
VUS1
6
Pathogenic
1
VUS

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories· variant type breakdown unavailable

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
6
Likely Pathogenic
0
VUS
1
Likely Benign
0
Benign
0
Total7

Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

TMEM210 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found