TLR1

Chr 4AR

toll like receptor 1

Also known as: CD281, TIL, TIL. LPRS5, rsc786

The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and functional similarities. They recognize pathogen-associated molecular patterns (PAMPs) that are expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective immunity. The various TLRs exhibit different patterns of expression. This gene is ubiquitously expressed, and at higher levels than other TLR genes. Different length transcripts presumably resulting from use of alternative polyadenylation site, and/or from alternative splicing, have been noted for this gene. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

{Leprosy, protection against}MIM #613223
{Leprosy, susceptibility to, 5}MIM #613223
Inflammatory bowel disease 32MIM #621601
AR
1
Active trials
179
Pubs (1 yr)
P/LP submissions
P/LP missense
1.85
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.85LOEUF
pLI 0.000
Z-score -1.73
OE 1.41 (1.051.85)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.70Z-score
OE missense 1.10 (1.011.19)
435 obs / 395.7 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.41 (1.051.85)
00.351.4
Missense OE?1.10 (1.011.19)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 29 / 20.6Missense obs/exp: 435 / 395.7Syn Z: -0.83

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TLR1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.