TLL1

Chr 4AD

tolloid like 1

Also known as: ASD6, TLL

This gene encodes an astacin-like, zinc-dependent, metalloprotease that belongs to the peptidase M12A family. This protease processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Studies in mice suggest that this gene plays multiple roles in the development of mammalian heart, and is essential for the formation of the interventricular septum. Allelic variants of this gene are associated with atrial septal defect type 6. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Atrial septal defect 6MIM #613087
AD

Clinical highlights

Gene-disease validity (ClinGen)
congenital heart disease · ADLimitednot for standalone diagnostic reporting
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
10
Pubs (1 yr)
P/LP submissions
P/LP missense
0.37
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.37LOEUF
pLI 0.173
Z-score 5.44
OE 0.24 (0.150.37)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.94Z-score
OE missense 0.89 (0.820.96)
484 obs / 545.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.24 (0.150.37)
00.351.4
Missense OE?0.89 (0.820.96)
00.61.4
Synonymous OE?1.09
01.21.6
LoF obs/exp: 14 / 59.1Missense obs/exp: 484 / 545.8Syn Z: -0.94

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

TLL1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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