THSD7A

Chr 7

thrombospondin type 1 domain containing 7A

The protein encoded by this gene is found almost exclusively in endothelial cells from placenta and umbilical cord. The encoded protein appears to interact with alpha(V)beta(3) integrin and paxillin to inhibit endothelial cell migration and tube formation. This protein may be involved in cytoskeletal organization. Variations in this gene may be associated with low bone mineral density in osteoporosis. [provided by RefSeq, Aug 2010]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
47
Pubs (1 yr)
P/LP submissions
P/LP missense
0.21
LOEUF· LoF intol.
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.21LOEUF
pLI 1.000
Z-score 8.06
OE 0.14 (0.090.21)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
-0.60Z-score
OE missense 1.06 (1.001.11)
947 obs / 896.6 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.14 (0.090.21)
00.351.4
Missense OE?1.06 (1.001.11)
00.61.4
Synonymous OE?1.22
01.21.6
LoF obs/exp: 14 / 101.7Missense obs/exp: 947 / 896.6Syn Z: -3.11

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

THSD7A · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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