TH2LCRR
Chr 5T helper type 2 locus control region associated RNA
520
ClinVar variants
50
Pathogenic / LP
—
pLI score
0
Active trials
Clinical Summary— TH2LCRR
📋
ClinVar Variants
50 Pathogenic / Likely Pathogenic· 291 VUS of 520 total submissions
Population Genetics & Constraint
Constraint data not available from gnomAD.
ClinVar Variant Classifications
520 submitted variants in ClinVar
Classification Summary
Pathogenic22
Likely Pathogenic28
VUS291
Likely Benign154
Benign1
Conflicting24
22
Pathogenic
28
Likely Pathogenic
291
VUS
154
Likely Benign
1
Benign
24
Conflicting
Curated Variants Distribution
Classified variants from ClinVar · 5 ACMG categories
| Classification | LoF | Missense + Inframe | Non-coding | Synonymous | Total |
|---|---|---|---|---|---|
Pathogenic | 12 | 0 | 10 | 0 | 22 |
Likely Pathogenic | 18 | 1 | 9 | 0 | 28 |
VUS | 11 | 250 | 29 | 1 | 291 |
Likely Benign | 1 | 1 | 59 | 93 | 154 |
Benign | 0 | 0 | 0 | 1 | 1 |
Conflicting | — | 24 | |||
| Total | 42 | 252 | 107 | 95 | 520 |
LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly
View in ClinVar →Protein Context — Lollipop Plot
TH2LCRR · protein map & ClinVar variants
Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.
OMIM — Genotype-Phenotype
No OMIM entries found.
External Resources
Links to major genomics databases and tools
Variant Interpretation
Population Databases
Gene Resources
Expert Curation
ClinGen
Expert-curated gene-disease validity
GenCC
Gene Curation Coalition — multi-curator classifications
Orphanet
Rare disease encyclopedia and gene-disease associations
PanelApp
Gene panels for rare disease diagnostics (Genomics England)
LOVD
Leiden Open Variation Database — variant listings
GeneReviews
Expert-authored summaries of heritable conditions (NCBI)
Clinical Literature
Landmark / reviewRecent case evidence
Key Publications
Landmark & review papers · by relevance
lncRNA Expression-Based Risk Scoring System Can Predict Survival of Tumor-Positive Patients with Hepatocellular Carcinoma.
Wu S et al.·Asian Pac J Cancer Prev
2021Cohort
Top 10 resultsSearch PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
LncRNAs IFNG-AS1 and TH2LCRR as potential biomarkers of Th1/Th2 imbalance in diabetic nephropathy: From bioinformatics to experimental validation.
Hosseini SAH et al.·Biochem Biophys Rep
2025🔓 Open Access
Aberrant Expression of TH2LCRR and GATA3 in Peripheral Blood Mononuclear Cells of Patients with Acute-Phase Schizophrenia: Integrative Bioinformatics Analysis and Experimental Study.
Moghiseh E et al.·Mol Neurobiol
2025Cohort
Convergent Evidence Supports TH2LCRR as a Novel Asthma Susceptibility Gene.
Li YK et al.·Am J Respir Cell Mol Biol
2022
Top 5 resultsSearch Europe PMC ↗
Clinical Trials
Active and recruiting trials from ClinicalTrials.gov
No active trials found for this gene.
Search ClinicalTrials.gov →External Resources
Links to major genomics databases and tools
Variant Interpretation
Population Databases
Gene Resources
Expert Curation
ClinGen
Expert-curated gene-disease validity
GenCC
Gene Curation Coalition — multi-curator classifications
Orphanet
Rare disease encyclopedia and gene-disease associations
PanelApp
Gene panels for rare disease diagnostics (Genomics England)
LOVD
Leiden Open Variation Database — variant listings
GeneReviews
Expert-authored summaries of heritable conditions (NCBI)