SUFU

Chr 10

SUFU negative regulator of hedgehog signaling

Also known as: BCNS2, JBTS32, PRO1280, SUFUH, SUFUXL

The Hedgehog signaling pathway plays an important role in early human development. The pathway is a signaling cascade that plays a role in pattern formation and cellular proliferation during development. This gene encodes a negative regulator of the hedgehog signaling pathway. Defects in this gene are a cause of medulloblastoma. Alternative splicing results in multiple transcript variants.[provided by RefSeq, May 2010]

GeneReviewsResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtMedulloblastoma
UniProtJoubert syndrome 32
UniProtBasal cell nevus syndrome 2

Clinical highlights

Gene-disease validity (ClinGen)
medulloblastoma · ADDefinitivesufficient evidence for diagnostic panels2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
111
Pubs (1 yr)
P/LP submissions
P/LP missense
0.11
LOEUF· LoF intol.
LOF
Mechanism· G2P
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GeneReview available — SUFU
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.11LOEUF
pLI 1.000
Z-score 4.80
OE 0.00 (0.000.11)
Highly constrained

Among the most LoF-intolerant genes (~top 3%)

Missense Constraint?
1.93Z-score
OE missense 0.68 (0.600.76)
194 obs / 286.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.00 (0.000.11)
00.351.4
Missense OE?0.68 (0.600.76)
00.61.4
Synonymous OE?0.92
01.21.6
LoF obs/exp: 0 / 26.9Missense obs/exp: 194 / 286.0Syn Z: 0.72

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SUFU · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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