STAT6

Chr 12AD

signal transducer and activator of transcription 6

Also known as: D12S1644, HIES6, IL-4-STAT, STAT6B, STAT6C

The protein encoded by this gene is a member of the STAT family of transcription factors. In response to cytokines and growth factors, STAT family members are phosphorylated by the receptor associated kinases, and then form homo- or heterodimers that translocate to the cell nucleus where they act as transcription activators. This protein plays a central role in exerting IL4 mediated biological responses. It is found to induce the expression of BCL2L1/BCL-X(L), which is responsible for the anti-apoptotic activity of IL4. Knockout studies in mice suggested the roles of this gene in differentiation of T helper 2 (Th2) cells, expression of cell surface markers, and class switch of immunoglobulins. Alternative splicing results in multiple transcript variants.[provided by RefSeq, May 2010]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Hyper-IgE syndrome 6, autosomal dominant, with recurrent infectionsMIM #620532
AD

Clinical highlights

Gene-disease validity (ClinGen)
hyper-IgE syndrome 6, autosomal dominant, with recurrent infections · ADStrongappropriate for clinical testing
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
653
Pubs (1 yr)
P/LP submissions
P/LP missense
0.30
LOEUF· LoF intol.
Mechanism
📖
GeneReview available — STAT6
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.30LOEUF
pLI 0.988
Z-score 5.41
OE 0.16 (0.100.30)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
2.41Z-score
OE missense 0.69 (0.630.76)
336 obs / 485.7 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.16 (0.100.30)
00.351.4
Missense OE?0.69 (0.630.76)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 8 / 48.7Missense obs/exp: 336 / 485.7Syn Z: 0.20

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

STAT6 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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