SPRYD7

Chr 13

SPRY domain containing 7

Also known as: C13orf1, CLLD6

This gene encodes a protein containing a SPRY domain that is involved in protein-protein interactions and cellular signaling pathways. Mutations in SPRYD7 cause autosomal recessive intellectual disability with distinctive facial features and developmental delay. The gene shows low constraint against loss-of-function variants, consistent with the recessive inheritance pattern observed in affected individuals.

LOEUF 1.25
Clinical SummarySPRYD7
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.25LOEUF
pLI 0.000
Z-score 1.01
OE 0.66 (0.381.25)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.33Z-score
OE missense 0.63 (0.520.78)
66 obs / 104.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.66 (0.381.25)
00.351.4
Missense OE0.63 (0.520.78)
00.61.4
Synonymous OE0.71
01.21.6
LoF obs/exp: 7 / 10.5Missense obs/exp: 66 / 104.1Syn Z: 1.42

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SPRYD7 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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