SNCAIP

Chr 5

synuclein alpha interacting protein

Also known as: SYPH1, Sph1

This gene encodes a protein containing several protein-protein interaction domains, including ankyrin-like repeats, a coiled-coil domain, and an ATP/GTP-binding motif. The encoded protein interacts with alpha-synuclein in neuronal tissue and may play a role in the formation of cytoplasmic inclusions and neurodegeneration. A mutation in this gene has been associated with Parkinson's disease. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2015]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtParkinson disease

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
9
Pubs (1 yr)
P/LP submissions
P/LP missense
0.55
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.55LOEUF
pLI 0.000
Z-score 3.70
OE 0.35 (0.230.55)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.77Z-score
OE missense 0.90 (0.830.98)
438 obs / 485.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.35 (0.230.55)
00.351.4
Missense OE?0.90 (0.830.98)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 13 / 37.4Missense obs/exp: 438 / 485.5Syn Z: 0.25

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SNCAIP · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →