SLX1B

Chr 16

structure-specific endonuclease subunit SLX1B

Also known as: GIYD2

This gene encodes a protein that is an important regulator of genome stability. The protein represents the catalytic subunit of the SLX1-SLX4 structure-specific endonuclease, which can resolve DNA secondary structures that are formed during repair and recombination processes. Two identical copies of this gene are located on the p arm of chromosome 16 due to a segmental duplication; this record represents the more telomeric copy. Alternative splicing results in multiple transcript variants. Read-through transcription also occurs between this gene and the downstream SULT1A4 (sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4) gene. [provided by RefSeq, Nov 2010]

OMIMResearchGenerating clinical summary…
LOEUF 1.72
Clinical SummarySLX1B
Population Constraint (gnomAD)
Low constraint (pLI 0.04) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.72LOEUF
pLI 0.044
Z-score 0.56
OE 0.66 (0.261.72)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.27Z-score
OE missense 0.26 (0.140.51)
6 obs / 23.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.66 (0.261.72)
00.351.4
Missense OE?0.26 (0.140.51)
00.61.4
Synonymous OE?0.21
01.21.6
LoF obs/exp: 2 / 3.0Missense obs/exp: 6 / 23.2Syn Z: 1.90

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SLX1B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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