SLC17A5

Chr 6AR

solute carrier family 17 member 5

Also known as: AST, ISSD, NSD, SD, SIALIN, SIASD, SLD, VEAT

This gene encodes a membrane transporter that exports free sialic acids that have been cleaved off of cell surface lipids and proteins from lysosomes. Mutations in this gene cause sialic acid storage diseases, including infantile sialic acid storage disorder and and Salla disease, an adult form. [provided by RefSeq, Jul 2008]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Salla diseaseMIM #604369
AR
Sialic acid storage disorder, infantileMIM #269920
AR
UniProtInfantile sialic acid storage disorder

Clinical highlights

Gene-disease validity (ClinGen)
free sialic acid storage disease · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
27
Pubs (1 yr)
P/LP submissions
P/LP missense
1.04
LOEUF
LOF
Mechanism· G2P
📖
GeneReview available — SLC17A5
Authoritative clinical overview · Recommended first read
Open GeneReview ↗

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.04LOEUF
pLI 0.000
Z-score 1.39
OE 0.70 (0.481.04)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.71Z-score
OE missense 0.88 (0.790.98)
230 obs / 262.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.70 (0.481.04)
00.351.4
Missense OE?0.88 (0.790.98)
00.61.4
Synonymous OE?0.93
01.21.6
LoF obs/exp: 18 / 25.6Missense obs/exp: 230 / 262.5Syn Z: 0.57

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SLC17A5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.