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SEPT5-GP1BB

Chr 22

SEPT5-GP1BB readthrough

This locus represents a naturally occurring read-through transcript between the SEPT5 and GP1BB genes that is subject to nonsense-mediated decay and unlikely to produce functional protein products. No disease associations have been established for this read-through transcript based on the available information.

ResearchSummary from RefSeq
Clinical SummarySEPT5-GP1BB
📋
ClinVar Variants
224 unique Pathogenic / Likely Pathogenic· 126 VUS of 393 total submissions
Some data sources returned errors (2)

ensembl: Error: Ensembl fetch failed: 400 for https://rest.ensembl.org/lookup/symbol/homo_sapiens/SEPT5-GP1BB?content-type=application/json&expand=1

gnomad: Error: Gene not found

Population Genetics & Constraint

Constraint data not available from gnomAD.

ClinVar Variant Classifications

393 submitted variants in ClinVar

Classification Summary

Pathogenic189
Likely Pathogenic35
VUS126
Likely Benign35
Benign4
Conflicting4
189
Pathogenic
35
Likely Pathogenic
126
VUS
35
Likely Benign
4
Benign
4
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
8
2
179
0
189
Likely Pathogenic
13
22
0
0
35
VUS
0
113
13
0
126
Likely Benign
2
5
4
24
35
Benign
0
3
1
0
4
Conflicting
4
Total2314519724393

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

SEPT5-GP1BB · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found