SEL1L

Chr 14AR

SEL1L adaptor subunit of SYVN1 ubiquitin ligase

Also known as: Hrd3, NEDGSAF, NEDHGFA, PRO1063, SEL1-LIKE, SEL1L1

The protein encoded by this gene is part of a protein complex required for the retrotranslocation or dislocation of misfolded proteins from the endoplasmic reticulum lumen to the cytosol, where they are degraded by the proteasome in a ubiquitin-dependent manner. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Neurodevelopmental disorder with poor growth, absent speech, progressive ataxia, and dysmorphic faciesMIM #621067
AR
Neurodevelopmental disorder with hypotonia, poor growth, dysmorphic facies, and agammaglobulinemiaMIM #621068
AR

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
48
Pubs (1 yr)
P/LP submissions
P/LP missense
0.30
LOEUF· LoF intol.
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.30LOEUF
pLI 0.982
Z-score 5.32
OE 0.17 (0.100.30)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
2.41Z-score
OE missense 0.67 (0.610.74)
289 obs / 429.9 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.17 (0.100.30)
00.351.4
Missense OE?0.67 (0.610.74)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 8 / 47.6Missense obs/exp: 289 / 429.9Syn Z: 0.16

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SEL1L · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →