SECISBP2

Chr 9AR

SECIS binding protein 2

Also known as: SBP2, THMA1

The protein binds to SECIS elements in the 3'-UTR of selenoprotein mRNAs and facilitates incorporation of selenocysteine at UGA codons during translation. Autosomal recessive mutations cause abnormal thyroid hormone metabolism type 1 through reduced activity of selenoproteins, particularly type II iodothyronine deiodinase. The pathogenic mechanism involves impaired selenocysteine insertion into selenoproteins, disrupting their enzymatic function.

OMIMResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismARLOEUF 1.031 OMIM phenotype
Clinical SummarySECISBP2
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.03LOEUF
pLI 0.000
Z-score 1.41
OE 0.77 (0.581.03)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.01Z-score
OE missense 1.00 (0.921.08)
439 obs / 439.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.77 (0.581.03)
00.351.4
Missense OE1.00 (0.921.08)
00.61.4
Synonymous OE1.22
01.21.6
LoF obs/exp: 33 / 42.9Missense obs/exp: 439 / 439.3Syn Z: -2.23

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SECISBP2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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