SAP18

Chr 13

Sin3A associated protein 18

Also known as: 2HOR0202, SAP18P

The encoded protein is a component of the SIN3 histone deacetylase complex that mediates transcriptional repression and also functions in the exon junction complex to regulate mRNA splicing, particularly inhibiting formation of proapoptotic splice variants. Mutations cause autosomal recessive neurodevelopmental disorder with seizures, microcephaly, and developmental delay. The gene shows moderate tolerance to loss-of-function variants (pLI 0.08, LOEUF 0.92), consistent with recessive inheritance.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 0.92
Clinical SummarySAP18
Population Constraint (gnomAD)
Low constraint (pLI 0.08) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.92LOEUF
pLI 0.083
Z-score 1.74
OE 0.35 (0.160.92)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
0.77Z-score
OE missense 0.79 (0.660.95)
80 obs / 101.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.35 (0.160.92)
00.351.4
Missense OE0.79 (0.660.95)
00.61.4
Synonymous OE1.39
01.21.6
LoF obs/exp: 3 / 8.5Missense obs/exp: 80 / 101.8Syn Z: -1.90

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

SAP18 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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