S100A1

Chr 1

S100 calcium binding protein A1

Also known as: S100, S100-alpha, S100A

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein may function in stimulation of Ca2+-induced Ca2+ release, inhibition of microtubule assembly, and inhibition of protein kinase C-mediated phosphorylation. Reduced expression of this protein has been implicated in cardiomyopathies. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…
0
Active trials
36
Pubs (1 yr)
P/LP submissions
P/LP missense
1.87
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.87LOEUF
pLI 0.006
Z-score -0.06
OE 1.04 (0.441.87)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.15Z-score
OE missense 1.06 (0.851.32)
57 obs / 53.8 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.04 (0.441.87)
00.351.4
Missense OE?1.06 (0.851.32)
00.61.4
Synonymous OE?1.03
01.21.6
LoF obs/exp: 3 / 2.9Missense obs/exp: 57 / 53.8Syn Z: -0.13

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

S100A1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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