RYR2

Chr 1AD

ryanodine receptor 2

Also known as: ARVC2, ARVD2, RYR-2, RyR, VACRDS, VTSIP

This gene encodes a ryanodine receptor found in cardiac muscle sarcoplasmic reticulum. The encoded protein is one of the components of a calcium channel, composed of a tetramer of the ryanodine receptor proteins and a tetramer of FK506 binding protein 1B proteins, that supplies calcium to cardiac muscle. Mutations in this gene are associated with stress-induced polymorphic ventricular tachycardia and arrhythmogenic right ventricular dysplasia. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…
GOFmechanismADLOEUF 0.252 OMIM phenotypes
Clinical SummaryRYR2
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Gene-Disease Validity (ClinGen)
hypertrophic cardiomyopathy · ADLimited

Limited evidence — not for standalone diagnostic reporting

4 total gene-disease associations curated

Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 1.00). One damaged copy is likely sufficient to cause disease.
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Clinical Trials
3 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.25LOEUF
pLI 1.000
Z-score 11.84
OE 0.20 (0.160.25)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
5.78Z-score
OE missense 0.68 (0.660.71)
1804 obs / 2639.8 exp
Constrained

Extremely missense-constrained (top ~0.01%)

Observed / Expected Ratios?
LoF OE?0.20 (0.160.25)
00.351.4
Missense OE?0.68 (0.660.71)
00.61.4
Synonymous OE?1.01
01.21.6
LoF obs/exp: 50 / 253.4Missense obs/exp: 1804 / 2639.8Syn Z: -0.20
Curated Mechanism (G2P)Gene2Phenotype (DDG2P) ↗
definitiveRYR2-related catecholaminergic polymorphic ventricular tachycardiaGOFAD
limitedRYR2-related hypertrophic cardiomyopathyOTHERAD
limitedRYR2-related arrhythmogenic right ventricular cardiomyopathyOTHERAD
limitedRYR2-related catecholaminergic polymorphic ventricular tachycardia and intellectual disabilityOTHERAD

This gene — mechanism propensity

DN
0.4586th %ile
GOF
0.5563th %ile
LOF
0.63top 25%

This gene has evidence for multiple mechanisms of pathogenicity (loss-of-function, gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to loss-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

LOFLOEUF 0.25
GOF1 literature citation
DN1 literature citation

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Literature Evidence

DNThe G4935R mutation completely abolished caffeine activation of and [3H]ryanodine binding to RyR2. Co-expression studies showed that the G4935R mutation exerted dominant negative impact on the RyR2 wildtype (WT) channel.1
GOFUnlike the gain-of-function mechanism observed in RYR2-mediated CPVT, the homozygous multiexon duplication precipitated a dramatic reduction in RYR2 transcription and RyR2 protein translation, a loss of function in calcium handling, and a calcium-induced calcium release apparatus that is insensitive2

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312. Mechanism ranking also informed by gnomAD constraint, ClinVar, and ClinGen data.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

RYR2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.