RNF170

Chr 8ADAR

ring finger protein 170

Also known as: ADSA, SNAX1, SPG85

This gene encodes a RING domain-containing protein that resides in the endoplasmic reticulum (ER) membrane. This protein functions as an E3 ubiquitin ligase and mediates ubiquitination and processing of inositol 1,4,5-trisphosphate (IP3) receptors via the ER-associated protein degradation pathway. It is recruited to the activated IP3 receptors by the ERLIN1/ERLIN2 complex to which it is constitutively bound. Mutations in this gene are associated with autosomal dominant sensory ataxia. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Ataxia, sensory, 1, autosomal dominantMIM #608984
AD
Spastic paraplegia 85, autosomal recessiveMIM #619686
AR

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
7
Pubs (1 yr)
P/LP submissions
P/LP missense
0.52
LOEUF
GOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.52LOEUF
pLI 0.511
Z-score 2.86
OE 0.20 (0.090.52)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.42Z-score
OE missense 0.66 (0.560.79)
93 obs / 140.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.20 (0.090.52)
00.351.4
Missense OE?0.66 (0.560.79)
00.61.4
Synonymous OE?0.85
01.21.6
LoF obs/exp: 3 / 14.9Missense obs/exp: 93 / 140.3Syn Z: 0.81

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

RNF170 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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