RNF157

Chr 17

ring finger protein 157

The protein functions as an E3 ubiquitin ligase that ubiquitinates APBB1 for proteasomal degradation, preventing neuronal apoptosis and promoting cell survival, while also serving as a scaffold molecule required for dendrite growth and maintenance. The protein acts downstream of PI3K and MAPK signaling pathways to regulate cell cycle processes. No associated human diseases have been reported for RNF157 mutations based on the available information.

Summary from RefSeq, UniProt
0
Active trials
3
Pubs (1 yr)
15
P/LP submissions
0%
P/LP missense
0.74
LOEUF
DN
Mechanism· predicted
Clinical SummaryRNF157
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
15 unique Pathogenic / Likely Pathogenic· 97 VUS of 148 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.74LOEUF
pLI 0.000
Z-score 2.85
OE 0.51 (0.360.74)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
0.81Z-score
OE missense 0.88 (0.810.97)
340 obs / 384.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.51 (0.360.74)
00.351.4
Missense OE0.88 (0.810.97)
00.61.4
Synonymous OE1.00
01.21.6
LoF obs/exp: 20 / 39.3Missense obs/exp: 340 / 384.6Syn Z: 0.03
DN
0.6744th %ile
GOF
0.5954th %ile
LOF
0.4037th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

148 submitted variants in ClinVar

Classification Summary

Pathogenic14
Likely Pathogenic1
VUS97
Likely Benign4
Benign4
14
Pathogenic
1
Likely Pathogenic
97
VUS
4
Likely Benign
4
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
14
0
14
Likely Pathogenic
0
0
1
0
1
VUS
0
93
4
0
97
Likely Benign
0
3
0
1
4
Benign
0
1
0
3
4
Total097194120

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

RNF157 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
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Full-Text Mentions
NLP-detected gene mentions in article bodies · via PubTator3
PubTator3
Top 3 full-text resultsSearch PubTator3 ↗