RIPPLY2

Chr 6AR

ripply transcriptional repressor 2

Also known as: C6orf159, SCDO6, dJ237I15.1

This gene encodes a nuclear protein that functions as a transcriptional repressor required for somite segregation and establishment of rostrocaudal polarity during somitogenesis. Mutations cause spondylocostal dysostosis 6, a congenital disorder characterized by vertebral segmentation defects and rib abnormalities, inherited in an autosomal recessive pattern. The gene shows low constraint against loss-of-function variants (pLI 0.009, LOEUF 1.26), consistent with the recessive inheritance pattern where heterozygous carriers are typically unaffected.

OMIMResearchSummary from RefSeq, OMIM, UniProt
ARLOEUF 1.261 OMIM phenotype
Clinical SummaryRIPPLY2
Population Constraint (gnomAD)
Low constraint (pLI 0.01) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.26LOEUF
pLI 0.009
Z-score 1.11
OE 0.55 (0.271.26)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.56Z-score
OE missense 1.19 (0.991.43)
82 obs / 69.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.55 (0.271.26)
00.351.4
Missense OE1.19 (0.991.43)
00.61.4
Synonymous OE0.77
01.21.6
LoF obs/exp: 4 / 7.2Missense obs/exp: 82 / 69.0Syn Z: 0.94

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

RIPPLY2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Key Publications
Landmark & review papers · by relevance
PubMed
Top 5 results · since 2015Search PubMed ↗