RHOBTB2

Chr 8AD

Rho related BTB domain containing 2

Regulator of cell proliferation and apoptosis (PubMed:21801820). It likely functions as a substrate-adapter that recruits key substrates, e.g. MSI2, to CUL3-based ubiquitin ligase complexes for degradation (PubMed:15107402, PubMed:27941885). Required for MSI2 ubiquitination and degradation (PubMed:27941885)

OMIMResearchGenerating clinical summary…
MultiplemechanismADLOEUF 0.501 OMIM phenotype
Clinical SummaryRHOBTB2
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Gene-Disease Validity (ClinGen)
complex neurodevelopmental disorder · ADDefinitive

Definitive — sufficient evidence for diagnostic panels

2 total gene-disease associations curated

Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.29) despite low pLI — interpret in context.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.50LOEUF
pLI 0.013
Z-score 3.83
OE 0.29 (0.180.50)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.66Z-score
OE missense 0.66 (0.600.72)
322 obs / 487.2 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.29 (0.180.50)
00.351.4
Missense OE?0.66 (0.600.72)
00.61.4
Synonymous OE?0.97
01.21.6
LoF obs/exp: 10 / 34.1Missense obs/exp: 322 / 487.2Syn Z: 0.38
Curated Mechanism (G2P)Gene2Phenotype (DDG2P) ↗
strongRHOBTB2-related developmental and epileptic encephalopathyOTHERAD

This gene — mechanism propensity

DN
0.7132th %ile
GOF
0.7028th %ile
LOF
0.3551th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

RHOBTB2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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