PYCARD

Chr 16

PYD and CARD domain containing

Also known as: ASC, CARD5, TMS, TMS-1, TMS1

This gene encodes an adaptor protein that is composed of two protein-protein interaction domains: a N-terminal PYRIN-PAAD-DAPIN domain (PYD) and a C-terminal caspase-recruitment domain (CARD). The PYD and CARD domains are members of the six-helix bundle death domain-fold superfamily that mediates assembly of large signaling complexes in the inflammatory and apoptotic signaling pathways via the activation of caspase. In normal cells, this protein is localized to the cytoplasm; however, in cells undergoing apoptosis, it forms ball-like aggregates near the nuclear periphery. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…
1
Active trials
76
Pubs (1 yr)
P/LP submissions
P/LP missense
1.90
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.90LOEUF
pLI 0.000
Z-score -0.44
OE 1.24 (0.611.90)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.40Z-score
OE missense 0.89 (0.761.05)
103 obs / 115.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?1.24 (0.611.90)
00.351.4
Missense OE?0.89 (0.761.05)
00.61.4
Synonymous OE?1.13
01.21.6
LoF obs/exp: 5 / 4.0Missense obs/exp: 103 / 115.2Syn Z: -0.74

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PYCARD · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.