PTK7

Chr 6

protein tyrosine kinase 7 (inactive)

Also known as: CCK-4, CCK4

This gene encodes a member of the receptor protein tyrosine kinase family of proteins that transduce extracellular signals across the cell membrane. The encoded protein lacks detectable catalytic tyrosine kinase activity, is involved in the Wnt signaling pathway and plays a role in multiple cellular processes including polarity and adhesion. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jul 2012]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
72
Pubs (1 yr)
P/LP submissions
P/LP missense
0.28
LOEUF· LoF intol.
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.28LOEUF
pLI 0.997
Z-score 5.69
OE 0.15 (0.090.28)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
2.24Z-score
OE missense 0.76 (0.700.81)
508 obs / 671.4 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.15 (0.090.28)
00.351.4
Missense OE?0.76 (0.700.81)
00.61.4
Synonymous OE?1.04
01.21.6
LoF obs/exp: 8 / 52.5Missense obs/exp: 508 / 671.4Syn Z: -0.55

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PTK7 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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