PTHLH

Chr 12AD

parathyroid hormone like hormone

Also known as: BDE2, HHM, PLP, PTHR, PTHRP

The protein encoded by this gene is a member of the parathyroid hormone family. This hormone, via its receptor, PTHR1, regulates endochondral bone development and epithelial-mesenchymal interactions during the formation of the mammary glands and teeth. It is responsible for most cases of humoral hypercalcemia of malignancy, and mutations in this gene are associated with brachydactyly type E2 (BDE2). Alternatively spliced transcript variants have been found for this gene. There is also evidence for alternative translation initiation from non-AUG (CUG and GUG) start sites, downstream of the initiator AUG codon, resulting in nuclear forms of this hormone. [provided by RefSeq, Nov 2013]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Brachydactyly, type E2MIM #613382
AD
UniProtBrachydactyly E2

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
42
Pubs (1 yr)
P/LP submissions
P/LP missense
0.48
LOEUF
LOF
Mechanism· G2P
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GeneReview available — PTHLH
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.48LOEUF
pLI 0.811
Z-score 2.62
OE 0.10 (0.040.48)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.15Z-score
OE missense 0.69 (0.570.83)
74 obs / 107.7 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.10 (0.040.48)
00.351.4
Missense OE?0.69 (0.570.83)
00.61.4
Synonymous OE?0.74
01.21.6
LoF obs/exp: 1 / 9.9Missense obs/exp: 74 / 107.7Syn Z: 1.39

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PTHLH · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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