PTGES2

Chr 9

prostaglandin E synthase 2

Also known as: C9orf15, GBF-1, PGES2, mPGES-2

The encoded protein is a membrane-associated prostaglandin E synthase that catalyzes the conversion of prostaglandin H2 to prostaglandin E2, and also activates transcription through gamma-interferon-activated transcription elements. Based on the provided information, no specific diseases associated with PTGES2 mutations or inheritance patterns have been documented. The extremely low pLI score suggests this gene is highly tolerant to loss-of-function mutations in the general population.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 1.28
Clinical SummaryPTGES2
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
39 unique Pathogenic / Likely Pathogenic· 66 VUS of 130 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.28LOEUF
pLI 0.000
Z-score 0.68
OE 0.83 (0.551.28)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.90Z-score
OE missense 0.82 (0.720.93)
165 obs / 201.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.83 (0.551.28)
00.351.4
Missense OE0.82 (0.720.93)
00.61.4
Synonymous OE0.99
01.21.6
LoF obs/exp: 15 / 18.1Missense obs/exp: 165 / 201.0Syn Z: 0.11

ClinVar Variant Classifications

130 submitted variants in ClinVar

Classification Summary

Pathogenic38
Likely Pathogenic1
VUS66
Likely Benign5
Benign1
38
Pathogenic
1
Likely Pathogenic
66
VUS
5
Likely Benign
1
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
38
0
38
Likely Pathogenic
0
0
1
0
1
VUS
0
64
2
0
66
Likely Benign
0
5
0
0
5
Benign
0
1
0
0
1
Total070410111

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

PTGES2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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