PSMD6

Chr 3

proteasome 26S subunit, non-ATPase 6

Also known as: Rpn7, S10, SGA-113M, p42A, p44S10

The encoded protein is a component of the 26S proteasome, a multiprotein complex that degrades ubiquitinated proteins in an ATP-dependent manner to maintain cellular protein homeostasis and participate in cell cycle progression, apoptosis, and DNA damage repair. Mutations cause autosomal recessive developmental and epileptic encephalopathy with onset in infancy or early childhood. This gene is highly constrained against loss-of-function mutations in the general population.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 0.23
Clinical SummaryPSMD6
Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 1.00). One damaged copy is likely sufficient to cause disease.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint
0.23LOEUF
pLI 0.995
Z-score 3.96
OE 0.05 (0.020.23)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint
1.26Z-score
OE missense 0.76 (0.670.86)
163 obs / 214.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.05 (0.020.23)
00.351.4
Missense OE0.76 (0.670.86)
00.61.4
Synonymous OE1.15
01.21.6
LoF obs/exp: 1 / 20.2Missense obs/exp: 163 / 214.8Syn Z: -1.08

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PSMD6 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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