PSMD10

Chr X

proteasome 26S subunit, non-ATPase 10

Also known as: dJ889N15.2, p28, p28(GANK)

The protein acts as a chaperone during assembly of the 26S proteasome's regulatory complex and is involved in protein degradation pathways. Mutations cause autosomal recessive neurodevelopmental disorder with seizures, hypotonia, and developmental delay, typically presenting in infancy or early childhood. The gene shows moderate constraint against loss-of-function variants (LOEUF 0.78), suggesting some intolerance to complete protein loss.

Summary from RefSeq, UniProt
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0
Active trials
4
Pubs (1 yr)
71
P/LP submissions
P/LP missense
0.78
LOEUF
Mechanism
Clinical SummaryPSMD10
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.50) — some intolerance to loss-of-function variants.
📋
ClinVar Variants
66 unique Pathogenic / Likely Pathogenic· 14 VUS of 144 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.78LOEUF
pLI 0.501
Z-score 1.91
OE 0.16 (0.060.78)
Moderately constrained

Typical tolerance to LoF variation

Missense Constraint
0.88Z-score
OE missense 0.73 (0.590.90)
60 obs / 82.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.16 (0.060.78)
00.351.4
Missense OE0.73 (0.590.90)
00.61.4
Synonymous OE0.93
01.21.6
LoF obs/exp: 1 / 6.1Missense obs/exp: 60 / 82.6Syn Z: 0.32

ClinVar Variant Classifications

144 submitted variants in ClinVar

Classification Summary

Pathogenic66
VUS14
Likely Benign1
66
Pathogenic
14
VUS
1
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories· variant type breakdown unavailable

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
66
Likely Pathogenic
0
VUS
14
Likely Benign
1
Benign
0
Total81

Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

PSMD10 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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