PPP2R5C

Chr 14AD

protein phosphatase 2 regulatory subunit B'gamma

Also known as: B56G, B56gamma, HJS4, PR61G

The protein encodes the gamma isoform of the B56 regulatory subunit of protein phosphatase 2A, which modulates substrate selectivity and catalytic activity of this major serine/threonine phosphatase involved in controlling cell growth and division. Mutations cause Houge-Janssens syndrome 4, inherited in an autosomal dominant pattern. The high pLI score (0.97) and low LOEUF score (0.32) indicate the gene is highly intolerant to loss-of-function variants, suggesting haploinsufficiency as the likely pathogenic mechanism.

OMIMResearchSummary from RefSeq, OMIM, UniProt
ADLOEUF 0.321 OMIM phenotype
Clinical SummaryPPP2R5C
Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 0.97). One damaged copy is likely sufficient to cause disease.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint
0.32LOEUF
pLI 0.971
Z-score 4.51
OE 0.15 (0.080.32)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint
3.08Z-score
OE missense 0.50 (0.440.57)
150 obs / 300.4 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios
LoF OE0.15 (0.080.32)
00.351.4
Missense OE0.50 (0.440.57)
00.61.4
Synonymous OE0.92
01.21.6
LoF obs/exp: 5 / 33.0Missense obs/exp: 150 / 300.4Syn Z: 0.69

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PPP2R5C · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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