POU4F1

Chr 13AD

POU class 4 homeobox 1

Also known as: ATITHS, BRN3A, Oct-T1, RDC-1, brn-3A

This gene encodes a member of the POU-IV class of neural transcription factors. This protein is expressed in a subset of retinal ganglion cells and may be involved in the developing sensory nervous system. This protein may also promote the growth of cervical tumors. A translocation of this gene is associated with some adult acute myeloid leukemias. [provided by RefSeq, Mar 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Ataxia, intention tremor, and hypotonia syndrome, childhood-onsetMIM #619352
AD

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
22
Pubs (1 yr)
P/LP submissions
P/LP missense
0.42
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.42LOEUF
pLI 0.888
Z-score 2.47
OE 0.00 (0.000.42)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.45Z-score
OE missense 0.46 (0.390.56)
77 obs / 165.8 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.00 (0.000.42)
00.351.4
Missense OE?0.46 (0.390.56)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 0 / 7.1Missense obs/exp: 77 / 165.8Syn Z: -0.53

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

POU4F1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →