POU2F1

Chr 1

POU class 2 homeobox 1

Also known as: OCT1, OTF1, Oct1Z, oct-1B

The OCT1 transcription factor was among the first identified members of the POU transcription factor family (summarized by Sturm et al., 1993 [PubMed 8314572]). Members of this family contain the POU domain, a 160-amino acid region necessary for DNA binding to the octameric sequence ATGCAAAT.[supplied by OMIM, Jul 2010]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
1
Active trials
34
Pubs (1 yr)
P/LP submissions
P/LP missense
0.34
LOEUF· LoF intol.
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.34LOEUF
pLI 0.902
Z-score 4.69
OE 0.18 (0.100.34)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
2.23Z-score
OE missense 0.69 (0.630.77)
292 obs / 420.8 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.18 (0.100.34)
00.351.4
Missense OE?0.69 (0.630.77)
00.61.4
Synonymous OE?1.01
01.21.6
LoF obs/exp: 7 / 38.4Missense obs/exp: 292 / 420.8Syn Z: -0.13

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

POU2F1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.