POR

Chr 7AR

cytochrome p450 oxidoreductase

Also known as: CPR, CYPOR, P450R

This gene encodes an endoplasmic reticulum membrane oxidoreductase that is essential for multiple metabolic processes, including reactions catalyzed by cytochrome P450 proteins for metabolism of steroid hormones, drugs and xenobiotics. The encoded protein has a flavin adenine dinucleotide (FAD)-binding domain and a flavodoxin-like domain which bind two cofactors, FAD and FMN, that allow it to donate electrons directly from NADPH to all microsomal P450 enzymes. Mutations in this gene cause a complex set of disorders, including apparent combined P450C17 and P450C21 deficiency, amenorrhea and disordered steroidogenesis, congenital adrenal hyperplasia and Antley-Bixler syndrome, that resemble those caused by defects in steroid metabolizing enzymes such as aromatase, 21-hydroxylase, and 17 alpha-hydroxylase. [provided by RefSeq, Aug 2020]

Primary Disease Associations & Inheritance

Antley-Bixler syndrome with genital anomalies and disordered steroidogenesisMIM #201750
AR
Disordered steroidogenesis due to cytochrome P450 oxidoreductaseMIM #613571
577
ClinVar variants
81
Pathogenic / LP
0.00
pLI score
6
Active trials
Clinical SummaryPOR
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Gene-Disease Validity (ClinGen)
Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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ClinVar Variants
81 Pathogenic / Likely Pathogenic· 143 VUS of 577 total submissions
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Clinical Trials
6 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
0.84LOEUF
pLI 0.000
Z-score 2.31
OE 0.58 (0.410.84)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
-0.07Z-score
OE missense 1.01 (0.931.09)
448 obs / 443.7 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.58 (0.410.84)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.1.01 (0.931.09)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.06
01.21.6
LoF obs/exp: 21 / 35.9Missense obs/exp: 448 / 443.7Syn Z: -0.67

ClinVar Variant Classifications

577 submitted variants in ClinVar

Classification Summary

Pathogenic48
Likely Pathogenic33
VUS143
Likely Benign313
Benign8
Conflicting32
48
Pathogenic
33
Likely Pathogenic
143
VUS
313
Likely Benign
8
Benign
32
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
24
1
23
0
48
Likely Pathogenic
21
5
7
0
33
VUS
2
118
23
0
143
Likely Benign
1
1
133
178
313
Benign
0
0
6
2
8
Conflicting
32
Total48125192180577

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

POR · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis

MIM #201750

Molecular basis of disorder known

Autosomal recessive

Disordered steroidogenesis due to cytochrome P450 oxidoreductase

MIM #613571

Molecular basis of disorder known

Clinical Literature
Landmark / reviewRecent case evidence
Key Publications
Landmark & review papers · by relevance
PubMed
MicroRNAs in POI, DOR and POR.
Luo J et al.·Arch Gynecol Obstet
2023Review
Top 10 resultsSearch PubMed ↗