POLR1E

Chr 9

RNA polymerase I subunit E

Also known as: A49, PAF53, PRAF1, RPA49

POLR1E encodes a component of RNA polymerase I that synthesizes ribosomal RNA precursors and mediates the interaction between RNA polymerase I and the transcription factor UBTF at gene promoters. Mutations cause autosomal recessive developmental delay with facial dysmorphism and dental anomalies, typically presenting in early childhood. This gene is highly constrained against loss-of-function mutations, indicating that complete loss of protein function is likely incompatible with normal development.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 0.92
Clinical SummaryPOLR1E
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.92LOEUF
pLI 0.000
Z-score 1.87
OE 0.59 (0.390.92)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
0.74Z-score
OE missense 0.86 (0.770.97)
204 obs / 236.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.59 (0.390.92)
00.351.4
Missense OE0.86 (0.770.97)
00.61.4
Synonymous OE0.79
01.21.6
LoF obs/exp: 14 / 23.9Missense obs/exp: 204 / 236.0Syn Z: 1.55

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

POLR1E · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 3 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found